Complete Chloroplast Genome Sequence of Phagomixotrophic Green Alga Cymbomonas tetramitiformis
Identifieur interne : 000043 ( Main/Exploration ); précédent : 000042; suivant : 000044Complete Chloroplast Genome Sequence of Phagomixotrophic Green Alga Cymbomonas tetramitiformis
Auteurs : Anchittha Satjarak [États-Unis] ; Amber E. Paasch [États-Unis] ; Linda E. Graham [États-Unis] ; Eunsoo Kim [États-Unis]Source :
- Genome Announcements [ 2169-8287 ] ; 2016.
Abstract
We report here the complete chloroplast genome sequence of
Url:
DOI: 10.1128/genomeA.00551-16
PubMed: 27313295
PubMed Central: 4911474
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: 000096
- to stream Pmc, to step Curation: 000096
- to stream Pmc, to step Checkpoint: 000041
- to stream Ncbi, to step Merge: 000738
- to stream Ncbi, to step Curation: 000738
- to stream Ncbi, to step Checkpoint: 000738
- to stream Main, to step Merge: 000043
- to stream Main, to step Curation: 000043
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Complete Chloroplast Genome Sequence of Phagomixotrophic Green Alga <italic>Cymbomonas tetramitiformis</italic></title><author><name sortKey="Satjarak, Anchittha" sort="Satjarak, Anchittha" uniqKey="Satjarak A" first="Anchittha" last="Satjarak">Anchittha Satjarak</name><affiliation wicri:level="2"><nlm:aff id="aff1"><addr-line>Department of Botany, University of Wisconsin-Madison, Madison, Wisconsin, USA</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Botany, University of Wisconsin-Madison, Madison, Wisconsin</wicri:regionArea><placeName><region type="state">Wisconsin</region></placeName></affiliation></author><author><name sortKey="Paasch, Amber E" sort="Paasch, Amber E" uniqKey="Paasch A" first="Amber E." last="Paasch">Amber E. Paasch</name><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>Division of Invertebrate Zoology and Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York, USA</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Invertebrate Zoology and Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York</wicri:regionArea><placeName><region type="state">État de New York</region></placeName></affiliation></author><author><name sortKey="Graham, Linda E" sort="Graham, Linda E" uniqKey="Graham L" first="Linda E." last="Graham">Linda E. Graham</name><affiliation wicri:level="2"><nlm:aff id="aff1"><addr-line>Department of Botany, University of Wisconsin-Madison, Madison, Wisconsin, USA</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Botany, University of Wisconsin-Madison, Madison, Wisconsin</wicri:regionArea><placeName><region type="state">Wisconsin</region></placeName></affiliation></author><author><name sortKey="Kim, Eunsoo" sort="Kim, Eunsoo" uniqKey="Kim E" first="Eunsoo" last="Kim">Eunsoo Kim</name><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>Division of Invertebrate Zoology and Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York, USA</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Invertebrate Zoology and Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York</wicri:regionArea><placeName><region type="state">État de New York</region></placeName></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">27313295</idno><idno type="pmc">4911474</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4911474</idno><idno type="RBID">PMC:4911474</idno><idno type="doi">10.1128/genomeA.00551-16</idno><date when="2016">2016</date><idno type="wicri:Area/Pmc/Corpus">000096</idno><idno type="wicri:Area/Pmc/Curation">000096</idno><idno type="wicri:Area/Pmc/Checkpoint">000041</idno><idno type="wicri:Area/Ncbi/Merge">000738</idno><idno type="wicri:Area/Ncbi/Curation">000738</idno><idno type="wicri:Area/Ncbi/Checkpoint">000738</idno><idno type="wicri:Area/Main/Merge">000043</idno><idno type="wicri:Area/Main/Curation">000043</idno><idno type="wicri:Area/Main/Exploration">000043</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Complete Chloroplast Genome Sequence of Phagomixotrophic Green Alga <italic>Cymbomonas tetramitiformis</italic></title><author><name sortKey="Satjarak, Anchittha" sort="Satjarak, Anchittha" uniqKey="Satjarak A" first="Anchittha" last="Satjarak">Anchittha Satjarak</name><affiliation wicri:level="2"><nlm:aff id="aff1"><addr-line>Department of Botany, University of Wisconsin-Madison, Madison, Wisconsin, USA</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Botany, University of Wisconsin-Madison, Madison, Wisconsin</wicri:regionArea><placeName><region type="state">Wisconsin</region></placeName></affiliation></author><author><name sortKey="Paasch, Amber E" sort="Paasch, Amber E" uniqKey="Paasch A" first="Amber E." last="Paasch">Amber E. Paasch</name><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>Division of Invertebrate Zoology and Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York, USA</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Invertebrate Zoology and Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York</wicri:regionArea><placeName><region type="state">État de New York</region></placeName></affiliation></author><author><name sortKey="Graham, Linda E" sort="Graham, Linda E" uniqKey="Graham L" first="Linda E." last="Graham">Linda E. Graham</name><affiliation wicri:level="2"><nlm:aff id="aff1"><addr-line>Department of Botany, University of Wisconsin-Madison, Madison, Wisconsin, USA</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Botany, University of Wisconsin-Madison, Madison, Wisconsin</wicri:regionArea><placeName><region type="state">Wisconsin</region></placeName></affiliation></author><author><name sortKey="Kim, Eunsoo" sort="Kim, Eunsoo" uniqKey="Kim E" first="Eunsoo" last="Kim">Eunsoo Kim</name><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>Division of Invertebrate Zoology and Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York, USA</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Invertebrate Zoology and Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York</wicri:regionArea><placeName><region type="state">État de New York</region></placeName></affiliation></author></analytic><series><title level="j">Genome Announcements</title><idno type="eISSN">2169-8287</idno><imprint><date when="2016">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>We report here the complete chloroplast genome sequence of <italic>Cymbomonas tetramitiformis</italic> strain PLY262, which is a prasinophycean green alga that retains a phagomixotrophic mode of nutrition. The genome is 84,524 bp in length, with a G+C content of 37%, and contains 3 rRNAs, 26 tRNAs, and 76 protein-coding genes.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Graham, Le" uniqKey="Graham L">LE Graham</name></author><author><name sortKey="Graham, Jm" uniqKey="Graham J">JM Graham</name></author><author><name sortKey="Wilcox, Lw" uniqKey="Wilcox L">LW Wilcox</name></author><author><name sortKey="Cook, Me" uniqKey="Cook M">ME Cook</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lewis, La" uniqKey="Lewis L">LA Lewis</name></author><author><name sortKey="Mccourt, Rm" uniqKey="Mccourt R">RM McCourt</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Maruyama, S" uniqKey="Maruyama S">S Maruyama</name></author><author><name sortKey="Kim, E" uniqKey="Kim E">E Kim</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bolger, Am" uniqKey="Bolger A">AM Bolger</name></author><author><name sortKey="Lohse, M" uniqKey="Lohse M">M Lohse</name></author><author><name sortKey="Usadel, B" uniqKey="Usadel B">B Usadel</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hahn, C" uniqKey="Hahn C">C Hahn</name></author><author><name sortKey="Bachmann, L" uniqKey="Bachmann L">L Bachmann</name></author><author><name sortKey="Chevreux, B" uniqKey="Chevreux B">B Chevreux</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Daugbjerg, N" uniqKey="Daugbjerg N">N Daugbjerg</name></author><author><name sortKey="Moestrup, " uniqKey="Moestrup ">Ø Moestrup</name></author><author><name sortKey="Arctander, P" uniqKey="Arctander P">P Arctander</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Li, H" uniqKey="Li H">H Li</name></author><author><name sortKey="Durbin, R" uniqKey="Durbin R">R Durbin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Quinlan, Ar" uniqKey="Quinlan A">AR Quinlan</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Goff, Sa" uniqKey="Goff S">SA Goff</name></author><author><name sortKey="Vaughn, M" uniqKey="Vaughn M">M Vaughn</name></author><author><name sortKey="Mckay, S" uniqKey="Mckay S">S McKay</name></author><author><name sortKey="Lyons, E" uniqKey="Lyons E">E Lyons</name></author><author><name sortKey="Stapleton, Ae" uniqKey="Stapleton A">AE Stapleton</name></author><author><name sortKey="Gessler, D" uniqKey="Gessler D">D Gessler</name></author><author><name sortKey="Matasci, N" uniqKey="Matasci N">N Matasci</name></author><author><name sortKey="Wang, L" uniqKey="Wang L">L Wang</name></author><author><name sortKey="Hanlon, M" uniqKey="Hanlon M">M Hanlon</name></author><author><name sortKey="Lenards, A" uniqKey="Lenards A">A Lenards</name></author><author><name sortKey="Muir, A" uniqKey="Muir A">A Muir</name></author><author><name sortKey="Merchant, N" uniqKey="Merchant N">N Merchant</name></author><author><name sortKey="Lowry, S" uniqKey="Lowry S">S Lowry</name></author><author><name sortKey="Mock, S" uniqKey="Mock S">S Mock</name></author><author><name sortKey="Helmke, M" uniqKey="Helmke M">M Helmke</name></author><author><name sortKey="Kubach, A" uniqKey="Kubach A">A Kubach</name></author><author><name sortKey="Narro, M" uniqKey="Narro M">M Narro</name></author><author><name sortKey="Hopkins, N" uniqKey="Hopkins N">N Hopkins</name></author><author><name sortKey="Micklos, D" uniqKey="Micklos D">D Micklos</name></author><author><name sortKey="Hilgert, U" uniqKey="Hilgert U">U Hilgert</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schattner, P" uniqKey="Schattner P">P Schattner</name></author><author><name sortKey="Brooks, An" uniqKey="Brooks A">AN Brooks</name></author><author><name sortKey="Lowe, Tm" uniqKey="Lowe T">TM Lowe</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lagesen, K" uniqKey="Lagesen K">K Lagesen</name></author><author><name sortKey="Hallin, P" uniqKey="Hallin P">P Hallin</name></author><author><name sortKey="R Dland, Ea" uniqKey="R Dland E">EA Rødland</name></author><author><name sortKey="Staerfeldt, H H" uniqKey="Staerfeldt H">H-H Staerfeldt</name></author><author><name sortKey="Rognes, T" uniqKey="Rognes T">T Rognes</name></author><author><name sortKey="Ussery, Dw" uniqKey="Ussery D">DW Ussery</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Green, Br" uniqKey="Green B">BR Green</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Turmel, M" uniqKey="Turmel M">M Turmel</name></author><author><name sortKey="Gagnon, Mc" uniqKey="Gagnon M">MC Gagnon</name></author><author><name sortKey="O Elly, Cj" uniqKey="O Elly C">CJ O’Kelly</name></author><author><name sortKey="Otis, C" uniqKey="Otis C">C Otis</name></author><author><name sortKey="Lemieux, C" uniqKey="Lemieux C">C Lemieux</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hunsperger, Hm" uniqKey="Hunsperger H">HM Hunsperger</name></author><author><name sortKey="Randhawa, T" uniqKey="Randhawa T">T Randhawa</name></author><author><name sortKey="Cattolico, Ra" uniqKey="Cattolico R">RA Cattolico</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yamazaki, S" uniqKey="Yamazaki S">S Yamazaki</name></author><author><name sortKey="Nomata, J" uniqKey="Nomata J">J Nomata</name></author><author><name sortKey="Fujita, Y" uniqKey="Fujita Y">Y Fujita</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>États-Unis</li></country><region><li>Wisconsin</li><li>État de New York</li></region></list><tree><country name="États-Unis"><region name="Wisconsin"><name sortKey="Satjarak, Anchittha" sort="Satjarak, Anchittha" uniqKey="Satjarak A" first="Anchittha" last="Satjarak">Anchittha Satjarak</name></region><name sortKey="Graham, Linda E" sort="Graham, Linda E" uniqKey="Graham L" first="Linda E." last="Graham">Linda E. Graham</name><name sortKey="Kim, Eunsoo" sort="Kim, Eunsoo" uniqKey="Kim E" first="Eunsoo" last="Kim">Eunsoo Kim</name><name sortKey="Paasch, Amber E" sort="Paasch, Amber E" uniqKey="Paasch A" first="Amber E." last="Paasch">Amber E. Paasch</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Ticri/CIDE/explor/CyberinfraV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000043 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000043 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Ticri/CIDE
|area= CyberinfraV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= PMC:4911474
|texte= Complete Chloroplast Genome Sequence of Phagomixotrophic Green Alga Cymbomonas tetramitiformis
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:27313295" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a CyberinfraV1
| This area was generated with Dilib version V0.6.25. |  |